Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hcn1O88704 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Mir3113-201ENSMUST00000175478 76 ntBASIC14.01□□□□□ -0.17
Hcn1O88704 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hcn1O88704 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.01□□□□□ -0.17
Hcn1O88704 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hcn1O88704 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hcn1O88704 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.01□□□□□ -0.17
Hcn1O88704 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hcn1O88704 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.01□□□□□ -0.17
Hcn1O88704 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hcn1O88704 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hcn1O88704 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hcn1O88704 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14□□□□□ -0.17
Hcn1O88704 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14□□□□□ -0.17
Hcn1O88704 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hcn1O88704 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Hcn1O88704 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hcn1O88704 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14□□□□□ -0.17
Hcn1O88704 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hcn1O88704 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.99□□□□□ -0.17
Hcn1O88704 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.99□□□□□ -0.17
Hcn1O88704 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.99□□□□□ -0.17
Hcn1O88704 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.99□□□□□ -0.17
Hcn1O88704 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.99□□□□□ -0.17
Hcn1O88704 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Hcn1O88704 Gm10175-201ENSMUST00000086013 645 ntBASIC13.99□□□□□ -0.17
Hcn1O88704 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Hcn1O88704 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hcn1O88704 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hcn1O88704 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Hcn1O88704 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hcn1O88704 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hcn1O88704 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.99□□□□□ -0.17
Hcn1O88704 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Hcn1O88704 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.98□□□□□ -0.17
Hcn1O88704 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Hcn1O88704 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Hcn1O88704 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.98□□□□□ -0.17
Hcn1O88704 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.98□□□□□ -0.17
Hcn1O88704 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms