Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.84■□□□□ 0.13
Slc6a20bO88575 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.84■□□□□ 0.13
Slc6a20bO88575 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.84■□□□□ 0.13
Slc6a20bO88575 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a20bO88575 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a20bO88575 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a20bO88575 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Slc6a20bO88575 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Slc6a20bO88575 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.83■□□□□ 0.13
Slc6a20bO88575 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a20bO88575 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.83■□□□□ 0.12
Slc6a20bO88575 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.83■□□□□ 0.12
Slc6a20bO88575 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a20bO88575 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Prob1-201ENSMUST00000097619 3021 ntBASIC15.82■□□□□ 0.12
Slc6a20bO88575 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Gm15198-201ENSMUST00000117283 177 ntBASIC15.82■□□□□ 0.12
Slc6a20bO88575 Gm17420-201ENSMUST00000164753 153 ntBASIC15.82■□□□□ 0.12
Slc6a20bO88575 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.82■□□□□ 0.12
Slc6a20bO88575 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.82■□□□□ 0.12
Slc6a20bO88575 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.82■□□□□ 0.12
Slc6a20bO88575 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.82■□□□□ 0.12
Slc6a20bO88575 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a20bO88575 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Gm9726-201ENSMUST00000180321 678 ntBASIC15.81■□□□□ 0.12
Slc6a20bO88575 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Gm45784-201ENSMUST00000188360 142 ntBASIC15.81■□□□□ 0.12
Slc6a20bO88575 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a20bO88575 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms