Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.95□□□□□ -0.18
Vti1bO88384 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.95□□□□□ -0.18
Vti1bO88384 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Gm7787-201ENSMUST00000216858 688 ntBASIC13.95□□□□□ -0.18
Vti1bO88384 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.95□□□□□ -0.18
Vti1bO88384 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vti1bO88384 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.95□□□□□ -0.18
Vti1bO88384 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vti1bO88384 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Vti1bO88384 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Vti1bO88384 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vti1bO88384 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.94□□□□□ -0.18
Vti1bO88384 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Vti1bO88384 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Gm27628-201ENSMUST00000184911 107 ntBASIC13.94□□□□□ -0.18
Vti1bO88384 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.94□□□□□ -0.18
Vti1bO88384 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vti1bO88384 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vti1bO88384 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.93□□□□□ -0.18
Vti1bO88384 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vti1bO88384 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vti1bO88384 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Gm12008-201ENSMUST00000117791 755 ntBASIC13.93□□□□□ -0.18
Vti1bO88384 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.93□□□□□ -0.18
Vti1bO88384 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vti1bO88384 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vti1bO88384 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vti1bO88384 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Vti1bO88384 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms