Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ubr1O70481 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Ubr1O70481 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Gm24196-201ENSMUST00000179161 110 ntBASIC18.64■□□□□ 0.57
Ubr1O70481 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.64■□□□□ 0.57
Ubr1O70481 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 AC156560.2-201ENSMUST00000221232 264 ntBASIC18.64■□□□□ 0.57
Ubr1O70481 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ubr1O70481 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.64■□□□□ 0.57
Ubr1O70481 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ubr1O70481 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ubr1O70481 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.64■□□□□ 0.57
Ubr1O70481 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubr1O70481 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.63■□□□□ 0.57
Ubr1O70481 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.63■□□□□ 0.57
Ubr1O70481 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Ubr1O70481 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC18.63■□□□□ 0.57
Ubr1O70481 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ubr1O70481 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ubr1O70481 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Gm43094-201ENSMUST00000196549 921 ntBASIC18.63■□□□□ 0.57
Ubr1O70481 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.63■□□□□ 0.57
Ubr1O70481 Gm6983-201ENSMUST00000214912 628 ntBASIC18.63■□□□□ 0.57
Ubr1O70481 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ubr1O70481 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubr1O70481 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.62■□□□□ 0.57
Ubr1O70481 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubr1O70481 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubr1O70481 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.62■□□□□ 0.57
Ubr1O70481 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubr1O70481 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ubr1O70481 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.61■□□□□ 0.57
Ubr1O70481 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.61■□□□□ 0.57
Ubr1O70481 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.61■□□□□ 0.57
Ubr1O70481 Gm43630-201ENSMUST00000201550 776 ntBASIC18.61■□□□□ 0.57
Ubr1O70481 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.61■□□□□ 0.57
Ubr1O70481 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ubr1O70481 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubr1O70481 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ubr1O70481 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms