Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cacna1bO55017 Gm5356-201ENSMUST00000093326 615 ntBASIC14.07□□□□□ -0.16
Cacna1bO55017 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.07□□□□□ -0.16
Cacna1bO55017 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1bO55017 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cacna1bO55017 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Gm45453-201ENSMUST00000211758 853 ntBASIC14.06□□□□□ -0.16
Cacna1bO55017 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.06□□□□□ -0.16
Cacna1bO55017 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Dancr-204ENSMUST00000132389 2347 ntBASIC14.06□□□□□ -0.16
Cacna1bO55017 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Gm6222-201ENSMUST00000120787 396 ntBASIC14.06□□□□□ -0.16
Cacna1bO55017 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.06□□□□□ -0.16
Cacna1bO55017 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1bO55017 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Cacna1bO55017 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.05□□□□□ -0.16
Cacna1bO55017 Gm2451-201ENSMUST00000199447 999 ntBASIC14.05□□□□□ -0.16
Cacna1bO55017 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.05□□□□□ -0.16
Cacna1bO55017 Gm10290-201ENSMUST00000200451 999 ntBASIC14.05□□□□□ -0.16
Cacna1bO55017 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.05□□□□□ -0.16
Cacna1bO55017 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacna1bO55017 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.05□□□□□ -0.16
Cacna1bO55017 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cacna1bO55017 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacna1bO55017 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacna1bO55017 Gm2495-201ENSMUST00000191160 466 ntBASIC14.04□□□□□ -0.16
Cacna1bO55017 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms