Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Prom1O54990 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.06■□□□□ 0.16
Prom1O54990 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Prom1O54990 Gm9182-201ENSMUST00000217829 639 ntBASIC16.06■□□□□ 0.16
Prom1O54990 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.06■□□□□ 0.16
Prom1O54990 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.06■□□□□ 0.16
Prom1O54990 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prom1O54990 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.06■□□□□ 0.16
Prom1O54990 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Prom1O54990 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Prom1O54990 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.05■□□□□ 0.16
Prom1O54990 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.05■□□□□ 0.16
Prom1O54990 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.05■□□□□ 0.16
Prom1O54990 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Prom1O54990 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Gm28760-201ENSMUST00000185995 736 ntBASIC16.05■□□□□ 0.16
Prom1O54990 Gm8515-201ENSMUST00000194852 576 ntBASIC16.05■□□□□ 0.16
Prom1O54990 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.05■□□□□ 0.16
Prom1O54990 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Prom1O54990 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prom1O54990 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 BC001981-202ENSMUST00000191393 1545 ntBASIC16.04■□□□□ 0.16
Prom1O54990 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.04■□□□□ 0.16
Prom1O54990 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.04■□□□□ 0.16
Prom1O54990 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.04■□□□□ 0.16
Prom1O54990 Gm37917-201ENSMUST00000194711 392 ntBASIC16.04■□□□□ 0.16
Prom1O54990 Gm45668-201ENSMUST00000211271 493 ntBASIC16.04■□□□□ 0.16
Prom1O54990 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Prom1O54990 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.04■□□□□ 0.16
Prom1O54990 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Prom1O54990 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prom1O54990 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Prom1O54990 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.03■□□□□ 0.16
Prom1O54990 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prom1O54990 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms