Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.23■□□□□ 0.03
Per2O54943 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.23■□□□□ 0.03
Per2O54943 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.23■□□□□ 0.03
Per2O54943 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Per2O54943 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Per2O54943 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.22■□□□□ 0.03
Per2O54943 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.22■□□□□ 0.03
Per2O54943 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.22■□□□□ 0.03
Per2O54943 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Per2O54943 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Per2O54943 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.21■□□□□ 0.03
Per2O54943 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Per2O54943 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.21■□□□□ 0.03
Per2O54943 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.21■□□□□ 0.03
Per2O54943 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.21■□□□□ 0.03
Per2O54943 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Gm45747-201ENSMUST00000212203 999 ntBASIC15.21■□□□□ 0.03
Per2O54943 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.21■□□□□ 0.03
Per2O54943 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.21■□□□□ 0.03
Per2O54943 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Per2O54943 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Per2O54943 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Per2O54943 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.21■□□□□ 0.02
Per2O54943 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Per2O54943 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Per2O54943 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.21■□□□□ 0.02
Per2O54943 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.21■□□□□ 0.02
Per2O54943 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Per2O54943 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Per2O54943 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Per2O54943 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.2■□□□□ 0.02
Per2O54943 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Per2O54943 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.2■□□□□ 0.02
Per2O54943 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.2■□□□□ 0.02
Per2O54943 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.2■□□□□ 0.02
Per2O54943 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Per2O54943 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Per2O54943 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Per2O54943 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.2■□□□□ 0.02
Per2O54943 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.2■□□□□ 0.02
Per2O54943 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Per2O54943 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms