Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarce1O54941 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarce1O54941 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Smarce1O54941 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.37■□□□□ 0.37
Smarce1O54941 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.37■□□□□ 0.37
Smarce1O54941 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smarce1O54941 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.37■□□□□ 0.37
Smarce1O54941 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Gm10060-201ENSMUST00000212002 111 ntBASIC17.37■□□□□ 0.37
Smarce1O54941 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Smarce1O54941 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.37■□□□□ 0.37
Smarce1O54941 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Smarce1O54941 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarce1O54941 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.37■□□□□ 0.37
Smarce1O54941 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smarce1O54941 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.36■□□□□ 0.37
Smarce1O54941 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smarce1O54941 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smarce1O54941 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.35■□□□□ 0.37
Smarce1O54941 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Smarce1O54941 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarce1O54941 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.35■□□□□ 0.37
Smarce1O54941 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.35■□□□□ 0.37
Smarce1O54941 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarce1O54941 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarce1O54941 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.35■□□□□ 0.37
Smarce1O54941 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.35■□□□□ 0.37
Smarce1O54941 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smarce1O54941 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Smarce1O54941 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.35■□□□□ 0.37
Smarce1O54941 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smarce1O54941 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarce1O54941 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Smarce1O54941 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Smarce1O54941 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.34■□□□□ 0.37
Smarce1O54941 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.34■□□□□ 0.37
Smarce1O54941 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms