Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Gm5177-201ENSMUST00000183092 997 ntBASIC15.7■□□□□ 0.1
Nr1i3O35627 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nr1i3O35627 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nr1i3O35627 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nr1i3O35627 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nr1i3O35627 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Nr1i3O35627 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Gm2651-201ENSMUST00000203560 838 ntBASIC15.68■□□□□ 0.1
Nr1i3O35627 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Gm45747-201ENSMUST00000212203 999 ntBASIC15.68■□□□□ 0.1
Nr1i3O35627 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nr1i3O35627 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nr1i3O35627 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nr1i3O35627 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nr1i3O35627 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nr1i3O35627 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.67■□□□□ 0.1
Nr1i3O35627 Gm27301-201ENSMUST00000184012 127 ntBASIC15.67■□□□□ 0.1
Nr1i3O35627 Gm37230-201ENSMUST00000194491 818 ntBASIC15.67■□□□□ 0.1
Nr1i3O35627 Gm45098-201ENSMUST00000207179 657 ntBASIC15.67■□□□□ 0.1
Nr1i3O35627 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nr1i3O35627 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nr1i3O35627 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nr1i3O35627 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nr1i3O35627 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nr1i3O35627 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms