Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Gm25948-201ENSMUST00000175334 112 ntBASIC13.55□□□□□ -0.24
Capn1O35350 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.55□□□□□ -0.24
Capn1O35350 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.55□□□□□ -0.24
Capn1O35350 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.55□□□□□ -0.24
Capn1O35350 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Capn1O35350 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.55□□□□□ -0.24
Capn1O35350 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Capn1O35350 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Capn1O35350 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Capn1O35350 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Capn1O35350 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Gm22065-201ENSMUST00000103753 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm22066-201ENSMUST00000103761 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24932-201ENSMUST00000103763 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24115-201ENSMUST00000103799 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm22190-201ENSMUST00000103827 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm22191-201ENSMUST00000103831 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24721-201ENSMUST00000103849 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm28018-201ENSMUST00000103869 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm26399-201ENSMUST00000103937 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Mir449b-201ENSMUST00000104833 80 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Gm14057-201ENSMUST00000120631 482 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Capn1O35350 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Gm25349-201ENSMUST00000177728 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm23616-201ENSMUST00000177797 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm25871-201ENSMUST00000177816 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24752-201ENSMUST00000178240 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24496-201ENSMUST00000178287 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm25649-201ENSMUST00000178476 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm25548-201ENSMUST00000178681 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm23147-201ENSMUST00000178841 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm26095-201ENSMUST00000179270 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm22171-201ENSMUST00000179283 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm23936-201ENSMUST00000179354 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm22619-201ENSMUST00000179516 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm25255-201ENSMUST00000179579 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24755-201ENSMUST00000179691 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm26506-201ENSMUST00000179692 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm25086-201ENSMUST00000179931 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm23243-201ENSMUST00000180047 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24659-201ENSMUST00000180212 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm24169-201ENSMUST00000180244 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm23689-201ENSMUST00000180354 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm27359-201ENSMUST00000184153 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm27785-201ENSMUST00000184268 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm27466-201ENSMUST00000184396 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Gm27703-201ENSMUST00000184836 110 ntBASIC13.54□□□□□ -0.24
Capn1O35350 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.54□□□□□ -0.24
Capn1O35350 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Capn1O35350 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.54□□□□□ -0.24
Capn1O35350 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.54□□□□□ -0.24
Capn1O35350 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Capn1O35350 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Capn1O35350 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.53□□□□□ -0.24
Capn1O35350 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Capn1O35350 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.53□□□□□ -0.24
Capn1O35350 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.53□□□□□ -0.24
Capn1O35350 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.53□□□□□ -0.24
Capn1O35350 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Capn1O35350 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Capn1O35350 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms