Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gm29518-201ENSMUST00000190858 372 ntBASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gm43767-201ENSMUST00000198933 381 ntBASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.41□□□□□ -0.58
Tnfsf11O35235 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.41□□□□□ -0.58
Tnfsf11O35235 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Tnfsf11O35235 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.4□□□□□ -0.58
Tnfsf11O35235 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.4□□□□□ -0.58
Tnfsf11O35235 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.4□□□□□ -0.58
Tnfsf11O35235 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.4□□□□□ -0.58
Tnfsf11O35235 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Tnfsf11O35235 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfsf11O35235 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Tnfsf11O35235 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.39□□□□□ -0.59
Tnfsf11O35235 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.39□□□□□ -0.59
Tnfsf11O35235 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Mir3081-201ENSMUST00000175305 84 ntBASIC11.39□□□□□ -0.59
Tnfsf11O35235 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.39□□□□□ -0.59
Tnfsf11O35235 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf11O35235 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms