Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Mir1982-201ENSMUST00000157368 74 ntBASIC18.53■□□□□ 0.56
Col15a1O35206 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.53■□□□□ 0.56
Col15a1O35206 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Col15a1O35206 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.53■□□□□ 0.56
Col15a1O35206 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col15a1O35206 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col15a1O35206 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col15a1O35206 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Col15a1O35206 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.52■□□□□ 0.56
Col15a1O35206 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col15a1O35206 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC18.52■□□□□ 0.55
Col15a1O35206 Gm8463-201ENSMUST00000208573 613 ntBASIC18.52■□□□□ 0.55
Col15a1O35206 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Gm5356-201ENSMUST00000093326 615 ntBASIC18.52■□□□□ 0.55
Col15a1O35206 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.52■□□□□ 0.55
Col15a1O35206 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col15a1O35206 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Col15a1O35206 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col15a1O35206 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC18.51■□□□□ 0.55
Col15a1O35206 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col15a1O35206 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Col15a1O35206 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col15a1O35206 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Col15a1O35206 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC18.5■□□□□ 0.55
Col15a1O35206 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.5■□□□□ 0.55
Col15a1O35206 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Col15a1O35206 Mir1894-201ENSMUST00000122802 81 ntBASIC18.5■□□□□ 0.55
Col15a1O35206 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC18.5■□□□□ 0.55
Col15a1O35206 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.5■□□□□ 0.55
Col15a1O35206 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.5■□□□□ 0.55
Col15a1O35206 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.5■□□□□ 0.55
Col15a1O35206 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.5■□□□□ 0.55
Col15a1O35206 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col15a1O35206 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col15a1O35206 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.49■□□□□ 0.55
Col15a1O35206 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col15a1O35206 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col15a1O35206 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms