Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.73□□□□□ -0.21
Cx3cl1O35188 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.73□□□□□ -0.21
Cx3cl1O35188 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Cx3cl1O35188 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.72□□□□□ -0.21
Cx3cl1O35188 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.72□□□□□ -0.21
Cx3cl1O35188 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cx3cl1O35188 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.71□□□□□ -0.21
Cx3cl1O35188 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.71□□□□□ -0.21
Cx3cl1O35188 Gm15483-201ENSMUST00000120338 456 ntBASIC13.71□□□□□ -0.21
Cx3cl1O35188 Gm11543-201ENSMUST00000120758 370 ntBASIC13.71□□□□□ -0.21
Cx3cl1O35188 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.71□□□□□ -0.21
Cx3cl1O35188 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cx3cl1O35188 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.71□□□□□ -0.21
Cx3cl1O35188 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cx3cl1O35188 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.71□□□□□ -0.22
Cx3cl1O35188 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cx3cl1O35188 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms