Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Alx4O35137 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.03□□□□□ -0.32
Alx4O35137 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Gm7222-201ENSMUST00000117512 906 ntBASIC13.03□□□□□ -0.32
Alx4O35137 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Gm18246-201ENSMUST00000221023 728 ntBASIC13.03□□□□□ -0.32
Alx4O35137 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.03□□□□□ -0.32
Alx4O35137 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.03□□□□□ -0.32
Alx4O35137 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Alx4O35137 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Alx4O35137 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Alx4O35137 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Alx4O35137 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Alx4O35137 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Gm25990-201ENSMUST00000102440 86 ntBASIC13.02□□□□□ -0.33
Alx4O35137 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Alx4O35137 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.02□□□□□ -0.33
Alx4O35137 Gm17807-201ENSMUST00000186869 298 ntBASIC13.02□□□□□ -0.33
Alx4O35137 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.02□□□□□ -0.33
Alx4O35137 Olfr286-202ENSMUST00000205305 969 ntBASIC13.02□□□□□ -0.33
Alx4O35137 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.02□□□□□ -0.33
Alx4O35137 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.02□□□□□ -0.33
Alx4O35137 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Alx4O35137 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Alx4O35137 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Alx4O35137 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.01□□□□□ -0.33
Alx4O35137 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.01□□□□□ -0.33
Alx4O35137 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.01□□□□□ -0.33
Alx4O35137 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.01□□□□□ -0.33
Alx4O35137 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Alx4O35137 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms