Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.02□□□□□ -0.97
Pkd1O08852 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.02□□□□□ -0.97
Pkd1O08852 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Pkd1O08852 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Pkd1O08852 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Pkd1O08852 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC9.02□□□□□ -0.97
Pkd1O08852 B9d1os-201ENSMUST00000137010 674 ntBASIC9.02□□□□□ -0.97
Pkd1O08852 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Gm27772-201ENSMUST00000184900 187 ntBASIC9.02□□□□□ -0.97
Pkd1O08852 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.02□□□□□ -0.97
Pkd1O08852 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Pkd1O08852 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC9.01□□□□□ -0.97
Pkd1O08852 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Pkd1O08852 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm14263-201ENSMUST00000117955 746 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.01□□□□□ -0.97
Pkd1O08852 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.01□□□□□ -0.97
Pkd1O08852 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Pkd1O08852 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm43548-201ENSMUST00000197139 2353 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Pkd1O08852 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.01□□□□□ -0.97
Pkd1O08852 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Pkd1O08852 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm5523-201ENSMUST00000180415 997 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Gm26927-201ENSMUST00000182385 965 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Gm6334-201ENSMUST00000207083 228 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm5161-201ENSMUST00000075243 853 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Pkd1O08852 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.01□□□□□ -0.97
Pkd1O08852 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Pkd1O08852 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9□□□□□ -0.97
Pkd1O08852 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9□□□□□ -0.97
Pkd1O08852 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Pkd1O08852 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Pkd1O08852 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9□□□□□ -0.97
Pkd1O08852 Gm5620-201ENSMUST00000077991 1348 ntBASIC9□□□□□ -0.97
Pkd1O08852 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Pkd1O08852 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms