Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shisa8J3QNX5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.34□□□□□ -0.27
Shisa8J3QNX5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.34□□□□□ -0.27
Shisa8J3QNX5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shisa8J3QNX5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.33□□□□□ -0.27
Shisa8J3QNX5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shisa8J3QNX5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Gm27704-201ENSMUST00000185094 107 ntBASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Gm7977-201ENSMUST00000193787 748 ntBASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shisa8J3QNX5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms