Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-3J3QMG8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Gm5479-201ENSMUST00000160578 435 ntBASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-3J3QMG8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13d-3J3QMG8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Trav13d-3J3QMG8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13d-3J3QMG8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gm6973-201ENSMUST00000117080 721 ntBASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gm4995-201ENSMUST00000117247 432 ntBASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gm11025-201ENSMUST00000140773 466 ntBASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gm45098-201ENSMUST00000207179 657 ntBASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-3J3QMG8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gm25911-201ENSMUST00000157621 56 ntBASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-3J3QMG8 Gm27920-201ENSMUST00000183953 96 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms