Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm24830-201ENSMUST00000102024 166 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm25890-201ENSMUST00000177643 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Rnu1b2-201ENSMUST00000178073 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Rnu1b1-201ENSMUST00000178250 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm22614-201ENSMUST00000178300 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm7985-201ENSMUST00000183329 981 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm22042-201ENSMUST00000082989 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm26232-201ENSMUST00000083360 166 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm24136-201ENSMUST00000083374 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Rnu1b6-201ENSMUST00000083839 166 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm26110-201ENSMUST00000083971 165 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Gm18905-201ENSMUST00000205454 928 ntBASIC7.54□□□□□ -1.2
Ubr4A2AN08 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ubr4A2AN08 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Mir686-201ENSMUST00000102174 109 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm7029-201ENSMUST00000173226 450 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm37042-201ENSMUST00000193816 581 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 AC192088.1-201ENSMUST00000227561 301 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm11964-201ENSMUST00000120982 444 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm6222-202ENSMUST00000182143 629 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm18473-201ENSMUST00000220543 868 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm3756-201ENSMUST00000169182 1355 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm12012-201ENSMUST00000118857 1066 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm38210-201ENSMUST00000191944 809 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm45481-201ENSMUST00000209717 877 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 AC132901.1-201ENSMUST00000224345 508 ntBASIC7.53□□□□□ -1.2
Ubr4A2AN08 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ubr4A2AN08 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC7.52□□□□□ -1.2
Ubr4A2AN08 Gm9678-201ENSMUST00000198979 1149 ntBASIC7.52□□□□□ -1.2
Ubr4A2AN08 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ubr4A2AN08 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms