Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Gm27300-201ENSMUST00000184085 97 ntBASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Gm27335-201ENSMUST00000184758 97 ntBASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc112A0AUP1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Gm2272-201ENSMUST00000194903 582 ntBASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc112A0AUP1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Mir8098-201ENSMUST00000184011 137 ntBASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc112A0AUP1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Gm5864-201ENSMUST00000202263 970 ntBASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc112A0AUP1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc112A0AUP1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms