Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Gm14042-201ENSMUST00000120139 833 ntBASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Gm37230-201ENSMUST00000194491 818 ntBASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm3854A0A1B0GSS6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm3854A0A1B0GSS6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm3854A0A1B0GSS6 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.58□□□□□ -0.07
Gm3854A0A1B0GSS6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Gm3854A0A1B0GSS6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm3854A0A1B0GSS6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
Gm3854A0A1B0GSS6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm8515-201ENSMUST00000194852 576 ntBASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm18187-201ENSMUST00000196476 984 ntBASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm6180-201ENSMUST00000065243 498 ntBASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Mir125a-201ENSMUST00000083545 68 ntBASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm3854A0A1B0GSS6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm3854A0A1B0GSS6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms