Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav13d-4A0A0G2JFX3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm23547-201ENSMUST00000158210 271 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm12008-201ENSMUST00000117791 755 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm27357-201ENSMUST00000183754 135 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm17807-201ENSMUST00000186869 298 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm43767-201ENSMUST00000198933 381 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Acot6-202ENSMUST00000222921 3622 ntBASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms