Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm44335-201ENSMUST00000196879 141 ntBASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm44297-201ENSMUST00000198304 141 ntBASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm44346-201ENSMUST00000198851 141 ntBASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm13015-201ENSMUST00000118674 204 ntBASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm10275-202ENSMUST00000168697 495 ntBASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Mir6990-201ENSMUST00000183724 91 ntBASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm10275-201ENSMUST00000092620 635 ntBASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm18737-201ENSMUST00000173594 937 ntBASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm27702-201ENSMUST00000184512 56 ntBASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Atg4a-psA0A0G2JFS9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms