Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3n-3A0A0G2JEM0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.08□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm8825-201ENSMUST00000182565 998 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm4518-201ENSMUST00000182638 718 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms