Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav6d-7A0A075B6B0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm11779-201ENSMUST00000118541 368 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Carlr-201ENSMUST00000181515 2574 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav6d-7A0A075B6B0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6d-7A0A075B6B0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms