Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav5-4A0A075B652 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav5-4A0A075B652 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Carlr-201ENSMUST00000181515 2574 ntBASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav5-4A0A075B652 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5-4A0A075B652 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms