Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav6-1A0A075B5Z8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm13418-201ENSMUST00000119097 944 ntBASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm11764-201ENSMUST00000120221 623 ntBASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6-1A0A075B5Z8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm7222-201ENSMUST00000117512 906 ntBASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav6-1A0A075B5Z8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav6-1A0A075B5Z8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms