Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trbv4A0A075B5I2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Gm11779-201ENSMUST00000118541 368 ntBASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv4A0A075B5I2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv4A0A075B5I2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.62□□□□□ -0.07
Trbv4A0A075B5I2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms