Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ClcnkaQ9WUB7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Gm23547-201ENSMUST00000158210 271 ntBASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ClcnkaQ9WUB7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Gm27525-201ENSMUST00000184465 107 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Gm43514-201ENSMUST00000198852 424 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Carlr-201ENSMUST00000181515 2574 ntBASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ClcnkaQ9WUB7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Gm11779-201ENSMUST00000118541 368 ntBASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Gm16198-201ENSMUST00000118766 670 ntBASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Gm15467-201ENSMUST00000120582 445 ntBASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Mir8117-201ENSMUST00000184773 107 ntBASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Gm17968-201ENSMUST00000194902 784 ntBASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms