Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col4a4Q9QZR9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Gm12241-201ENSMUST00000118330 726 ntBASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col4a4Q9QZR9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Gm22323-201ENSMUST00000103832 109 ntBASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col4a4Q9QZR9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col4a4Q9QZR9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.31□□□□□ -0.12
Col4a4Q9QZR9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms