Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gm10275-201ENSMUST00000092620 635 ntBASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Upk3aQ9JKX8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm22065-201ENSMUST00000103753 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm22066-201ENSMUST00000103761 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24932-201ENSMUST00000103763 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24115-201ENSMUST00000103799 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm22190-201ENSMUST00000103827 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm22191-201ENSMUST00000103831 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24721-201ENSMUST00000103849 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm28018-201ENSMUST00000103869 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm26399-201ENSMUST00000103937 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm25349-201ENSMUST00000177728 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm23616-201ENSMUST00000177797 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm25871-201ENSMUST00000177816 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24752-201ENSMUST00000178240 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24496-201ENSMUST00000178287 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm25649-201ENSMUST00000178476 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm25548-201ENSMUST00000178681 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm23147-201ENSMUST00000178841 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm26095-201ENSMUST00000179270 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm22171-201ENSMUST00000179283 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm23936-201ENSMUST00000179354 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm22619-201ENSMUST00000179516 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm25255-201ENSMUST00000179579 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24755-201ENSMUST00000179691 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm26506-201ENSMUST00000179692 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm25086-201ENSMUST00000179931 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm23243-201ENSMUST00000180047 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24659-201ENSMUST00000180212 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm24169-201ENSMUST00000180244 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm23689-201ENSMUST00000180354 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm27359-201ENSMUST00000184153 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm27785-201ENSMUST00000184268 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm27466-201ENSMUST00000184396 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm27703-201ENSMUST00000184836 110 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk3aQ9JKX8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms