Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
OtofQ9ESF1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Gm9794-201ENSMUST00000202370 423 ntBASIC14.42□□□□□ -0.1
OtofQ9ESF1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.42□□□□□ -0.1
OtofQ9ESF1 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.42□□□□□ -0.1
OtofQ9ESF1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
OtofQ9ESF1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.41□□□□□ -0.1
OtofQ9ESF1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Gm12138-201ENSMUST00000122180 951 ntBASIC14.41□□□□□ -0.1
OtofQ9ESF1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.41□□□□□ -0.1
OtofQ9ESF1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Gm18624-201ENSMUST00000220966 658 ntBASIC14.41□□□□□ -0.1
OtofQ9ESF1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
OtofQ9ESF1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.4□□□□□ -0.1
OtofQ9ESF1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
OtofQ9ESF1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
OtofQ9ESF1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms