Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Gm43179-201ENSMUST00000198797 275 ntBASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Nkx2-4Q9EQM3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Gm14660-201ENSMUST00000119809 575 ntBASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkx2-4Q9EQM3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Gm8749-201ENSMUST00000117737 331 ntBASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Gm27731-201ENSMUST00000185192 107 ntBASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-4Q9EQM3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Olfr286-202ENSMUST00000205305 969 ntBASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms