Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpsf1Q9EPU4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Gm11424-201ENSMUST00000121929 829 ntBASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Gm7390-201ENSMUST00000212452 1216 ntBASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cpsf1Q9EPU4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.97■□□□□ 0.79
Cpsf1Q9EPU4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Gm6218-201ENSMUST00000219812 628 ntBASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Gm6159-201ENSMUST00000191249 1724 ntBASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Cpsf1Q9EPU4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Gm12585-201ENSMUST00000117307 290 ntBASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC19.95■□□□□ 0.78
Cpsf1Q9EPU4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Gm12859-201ENSMUST00000117834 427 ntBASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Gm10766-202ENSMUST00000194123 606 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms