Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne8Q9DC53 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpne8Q9DC53 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm15483-201ENSMUST00000120338 456 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm18733-201ENSMUST00000173950 856 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm2272-201ENSMUST00000194903 582 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm5364-201ENSMUST00000216789 889 ntBASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpne8Q9DC53 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.25■□□□□ 0.03
Cpne8Q9DC53 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Gm1401-201ENSMUST00000122048 772 ntBASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne8Q9DC53 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne8Q9DC53 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne8Q9DC53 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms