Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Gm7461-201ENSMUST00000058918 827 ntBASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4cQ9D7F7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4cQ9D7F7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Gm12134-201ENSMUST00000122109 520 ntBASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4cQ9D7F7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Gm27300-201ENSMUST00000184085 97 ntBASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Gm27335-201ENSMUST00000184758 97 ntBASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4cQ9D7F7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4cQ9D7F7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp4cQ9D7F7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms