Protein–RNA interactions for Protein: Q9CZA6

Nde1, Nuclear distribution protein nudE homolog 1, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nde1Q9CZA6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nde1Q9CZA6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.31□□□□□ -0.12
Nde1Q9CZA6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.31□□□□□ -0.12
Nde1Q9CZA6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Gm15794-201ENSMUST00000120182 631 ntBASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Gm12497-201ENSMUST00000138778 237 ntBASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Mir3081-201ENSMUST00000175305 84 ntBASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nde1Q9CZA6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Gm6345-202ENSMUST00000180900 204 ntBASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Gm17808-201ENSMUST00000200859 894 ntBASIC14.29□□□□□ -0.12
Nde1Q9CZA6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nde1Q9CZA6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms