Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Celf4-206ENSMUST00000224553 1729 ntBASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTRAFQ9CQE8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm15039-201ENSMUST00000118914 875 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm11355-201ENSMUST00000121120 306 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm19164-201ENSMUST00000210667 640 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Gm10812-201ENSMUST00000099864 546 ntBASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTRAFQ9CQE8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RTRAFQ9CQE8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RTRAFQ9CQE8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
RTRAFQ9CQE8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
RTRAFQ9CQE8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm13436-201ENSMUST00000120418 567 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm25406-201ENSMUST00000157599 105 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm8825-201ENSMUST00000182565 998 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm4518-201ENSMUST00000182638 718 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTRAFQ9CQE8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms