Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm11764-201ENSMUST00000120221 623 ntBASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nipsnap3bQ9CQE1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm7862-201ENSMUST00000121461 292 ntBASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nipsnap3bQ9CQE1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm7153-201ENSMUST00000117092 455 ntBASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Gm10819-201ENSMUST00000099988 561 ntBASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nipsnap3bQ9CQE1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms