Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ska1Q9CPV1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ska1Q9CPV1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Ska1Q9CPV1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ska1Q9CPV1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ska1Q9CPV1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ska1Q9CPV1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.83□□□□□ -0.2
Ska1Q9CPV1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ska1Q9CPV1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Gm27459-201ENSMUST00000184860 107 ntBASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Rps4l-201ENSMUST00000071745 943 ntBASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ska1Q9CPV1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Gm13418-201ENSMUST00000119097 944 ntBASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ska1Q9CPV1 Gm18489-201ENSMUST00000172565 551 ntBASIC13.81□□□□□ -0.2
Ska1Q9CPV1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms