Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Gm9899-201ENSMUST00000065519 555 ntBASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cntnap4Q99P47 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.67■□□□□ 0.1
Cntnap4Q99P47 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Mir1938-201ENSMUST00000158746 100 ntBASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cntnap4Q99P47 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm8749-201ENSMUST00000117737 331 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm12151-201ENSMUST00000121374 290 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm25144-201ENSMUST00000179561 110 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm25352-201ENSMUST00000179815 110 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Gm45098-201ENSMUST00000207179 657 ntBASIC15.66■□□□□ 0.1
Cntnap4Q99P47 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cntnap4Q99P47 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Gm17837-201ENSMUST00000186435 985 ntBASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Gm6888-201ENSMUST00000221983 706 ntBASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cntnap4Q99P47 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms