Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Thumpd1Q99J36 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd1Q99J36 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gm12644-201ENSMUST00000119935 606 ntBASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gm12895-201ENSMUST00000122214 226 ntBASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gm11780-201ENSMUST00000136880 516 ntBASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gm27357-201ENSMUST00000183754 135 ntBASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd1Q99J36 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms