Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Gm12008-201ENSMUST00000117791 755 ntBASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh18Q8VHR0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdh18Q8VHR0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Pcdh18Q8VHR0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Pcdh18Q8VHR0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Pcdh18Q8VHR0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh18Q8VHR0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdh18Q8VHR0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms