Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm24513-201ENSMUST00000174964 138 ntBASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rpap2Q8VC34 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm2810-201ENSMUST00000118681 990 ntBASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm2756-201ENSMUST00000195851 400 ntBASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Rpap2Q8VC34 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Gm14042-201ENSMUST00000120139 833 ntBASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Gm13365-201ENSMUST00000121188 973 ntBASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Gm27397-201ENSMUST00000184997 107 ntBASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Gm2213-201ENSMUST00000197485 688 ntBASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.03■□□□□ 0.16
Rpap2Q8VC34 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rpap2Q8VC34 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.02■□□□□ 0.16
Rpap2Q8VC34 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Rpap2Q8VC34 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms