Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Atf7Q8R0S1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Gm37230-201ENSMUST00000194491 818 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf7Q8R0S1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf7Q8R0S1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Gm14042-201ENSMUST00000120139 833 ntBASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Gm27920-201ENSMUST00000183953 96 ntBASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Gm5264-201ENSMUST00000190584 848 ntBASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf7Q8R0S1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms