Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.81□□□□□ -0.2
Clrn1Q8K445 Gm13464-201ENSMUST00000119418 935 ntBASIC13.81□□□□□ -0.2
Clrn1Q8K445 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.81□□□□□ -0.2
Clrn1Q8K445 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.81□□□□□ -0.2
Clrn1Q8K445 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn1Q8K445 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm10175-201ENSMUST00000086013 645 ntBASIC13.8□□□□□ -0.2
Clrn1Q8K445 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.8□□□□□ -0.2
Clrn1Q8K445 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.8□□□□□ -0.2
Clrn1Q8K445 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn1Q8K445 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gm11594-201ENSMUST00000122313 162 ntBASIC13.79□□□□□ -0.2
Clrn1Q8K445 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gm9726-201ENSMUST00000180321 678 ntBASIC13.79□□□□□ -0.2
Clrn1Q8K445 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clrn1Q8K445 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms