Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rtn1Q8K0T0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm37935-201ENSMUST00000192012 982 ntBASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rtn1Q8K0T0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm27702-201ENSMUST00000184512 56 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm37230-201ENSMUST00000194491 818 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm2756-201ENSMUST00000195851 400 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Gm9182-201ENSMUST00000217829 639 ntBASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rtn1Q8K0T0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Gm23547-201ENSMUST00000158210 271 ntBASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Gm18889-201ENSMUST00000174284 929 ntBASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rtn1Q8K0T0 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms