Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syne4Q8CII8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Syne4Q8CII8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Syne4Q8CII8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syne4Q8CII8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Syne4Q8CII8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.46■□□□□ 0.23
Syne4Q8CII8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Mir1982-201ENSMUST00000157368 74 ntBASIC16.46■□□□□ 0.23
Syne4Q8CII8 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.46■□□□□ 0.23
Syne4Q8CII8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.46■□□□□ 0.23
Syne4Q8CII8 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.46■□□□□ 0.23
Syne4Q8CII8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.46■□□□□ 0.23
Syne4Q8CII8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syne4Q8CII8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Syne4Q8CII8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.45■□□□□ 0.22
Syne4Q8CII8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Syne4Q8CII8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.45■□□□□ 0.22
Syne4Q8CII8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.45■□□□□ 0.22
Syne4Q8CII8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.45■□□□□ 0.22
Syne4Q8CII8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.44■□□□□ 0.22
Syne4Q8CII8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Mir7654-201ENSMUST00000185082 70 ntBASIC16.44■□□□□ 0.22
Syne4Q8CII8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.44■□□□□ 0.22
Syne4Q8CII8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syne4Q8CII8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.43■□□□□ 0.22
Syne4Q8CII8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syne4Q8CII8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms