Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.95□□□□□ -0.02
CopaQ8CIE6 Gm13365-201ENSMUST00000121188 973 ntBASIC14.95□□□□□ -0.02
CopaQ8CIE6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.95□□□□□ -0.02
CopaQ8CIE6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CopaQ8CIE6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.95□□□□□ -0.02
CopaQ8CIE6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.95□□□□□ -0.02
CopaQ8CIE6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CopaQ8CIE6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.94□□□□□ -0.02
CopaQ8CIE6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Gm16198-201ENSMUST00000118766 670 ntBASIC14.94□□□□□ -0.02
CopaQ8CIE6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.94□□□□□ -0.02
CopaQ8CIE6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CopaQ8CIE6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm9385-201ENSMUST00000117563 472 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm15920-201ENSMUST00000118998 402 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm11745-201ENSMUST00000121669 448 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Auts2-212ENSMUST00000178555 309 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.93□□□□□ -0.02
CopaQ8CIE6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CopaQ8CIE6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CopaQ8CIE6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms