Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm24543-201ENSMUST00000103867 82 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm29310-201ENSMUST00000185468 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21825-201ENSMUST00000185728 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm29109-201ENSMUST00000185895 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21896-201ENSMUST00000186520 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21873-201ENSMUST00000186728 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21794-201ENSMUST00000187056 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21880-201ENSMUST00000187275 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21826-201ENSMUST00000187451 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21198-201ENSMUST00000188393 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21749-201ENSMUST00000189343 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21901-201ENSMUST00000189568 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm29424-201ENSMUST00000189716 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm28599-201ENSMUST00000189838 694 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21867-201ENSMUST00000189917 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm29269-201ENSMUST00000190087 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21722-201ENSMUST00000190153 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm28423-201ENSMUST00000190701 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21899-201ENSMUST00000190745 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21910-201ENSMUST00000191163 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21849-201ENSMUST00000191571 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm28678-201ENSMUST00000191593 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm20910-201ENSMUST00000193268 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm21871-201ENSMUST00000194621 696 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Gm37305-201ENSMUST00000195714 4279 ntBASIC18.01■□□□□ 0.47
Smc4Q8CG47 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc4Q8CG47 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18■□□□□ 0.47
Smc4Q8CG47 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18■□□□□ 0.47
Smc4Q8CG47 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Smc4Q8CG47 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc4Q8CG47 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm6222-201ENSMUST00000120787 396 ntBASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm27533-201ENSMUST00000183800 152 ntBASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.99■□□□□ 0.47
Smc4Q8CG47 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms