Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc38Q8CDN8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm16198-201ENSMUST00000118766 670 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm16026-204ENSMUST00000162652 683 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.27■□□□□ 0.2
Ccdc38Q8CDN8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc38Q8CDN8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc38Q8CDN8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc38Q8CDN8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms